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Monday, March 16, 2009

FluxBalance Analysis with SBW

Herbert came across the LPsolve, a LPGL library for solving linear programming questions. Steady state flux balance analysis can be stated as linear programming question. This is what the new SBW FluxBalance module does:


You can load an SBML file, specify all flux constraints and your objective that is to be minimized / maximized and the module will solve the LP problem.

The prototype is available for download. In the near future this functionality will also be included in LibStructural.

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